[firedrake] Firedrake Installation

[Florian Rathgeber]

On 18/11/14 08:15, Lee, Suet wrote:
> Hi,
> 
> I tried
> 
> export LD_PRELOAD=/usr/lib/openmpi/lib/libmpi.so
> 
> and then,
> 
> wget -O - https://github.com/OP2/PyOP2/raw/master/install.sh | sudo bash
> 
> again with no luck :(
> 
> My operating system is Windows 7 Home Premium

Sorry, I don't have anything more to suggest. Lawrence or anyone else?

> Suet
> 
> ________________________________________
> From: Florian Rathgeber <florian.rathgeber at imperial.ac.uk>
> Sent: 16 November 2014 14:44
> To: Lee, Suet; McRae, Andrew
> Cc: firedrake
> Subject: Re: Firedrake Installation
> 
> On 16/11/14 14:35, Lee, Suet wrote:
>> I tried it again for libmpich-dev but it doesn't seem to be installed either.
>>
>> mosh at ubuntu:~$ dpkg -s libmpich-dev
>> dpkg-query: package 'libmpich-dev' is not installed and no information is available
>> Use dpkg --info (= dpkg-deb --info) to examine archive files,
>> and dpkg --contents (= dpkg-deb --contents) to list their contents.
> 
> Hmm, unsure then. Do you have LD_PRELOAD set? If not, try:
> 
>   export LD_PRELOAD=/usr/lib/openmpi/lib/libmpi.so
> 
>> 64bit doesn't work on my laptop for some reason (it's old) - it makes the graphics go funny and I can't see anything.
> 
> For 64bit guests your CPU needs to have support for VT-x and it needs to
> be enabled in the BIOS - maybe that's why it isn't working properly?
> What is your host OS?
> 
> I tried with Vagrant on 14.04 x64 and got a gcc internal compiler
> failure (!) when building petsc4py (Lawrence, any ideas?)
> 
> """
> /usr/bin/mpicc -pthread -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing
> -Wno-unknown-pragmas -O -fPIC -fno-strict-aliasing -DNDEBUG -g -fwrapv
> -O2 -Wall -D_FO
> RTIFY_SOURCE=2 -g -fstack-protector --param=ssp-buffer-size=4 -Wformat
> -Werror=format-security
> -DPETSC_DIR=/usr/local/lib/python2.7/dist-packages/petsc -I/usr/
> lib/openmpi/include/openmpi -I/usr/lib/openmpi/include
> -I/usr/local/lib/python2.7/dist-packages/petsc/include -Isrc/include
> -I/usr/local/lib/python2.7/dist-pac
> kages/numpy/core/include -I/usr/include/python2.7 -c src/PETSc.c -o
> build/temp.linux-x86_64-2.7/src/PETSc.o
> 
> In file included from
> /usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1804:0,
>                  from
> /usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
>                  from
> /usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
>                  from src/include/petsc4py/numpy.h:11,
>                  from src/petsc4py.PETSc.c:240,
>                  from src/PETSc.c:3:
> 
> /usr/local/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2:
> warning: #warning "Using deprecated NumPy API, disable it by "
> "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
> 
>  #warning "Using deprecated NumPy API, disable it by " \
>   ^
> 
> gcc: internal compiler error: Killed (program cc1)
> """
> 
> Florian
> 
>> Suet
>>
>> ________________________________________
>> From: Florian Rathgeber <florian.rathgeber at imperial.ac.uk>
>> Sent: 16 November 2014 14:22
>> To: Lee, Suet; McRae, Andrew
>> Cc: firedrake
>> Subject: Re: Firedrake Installation
>>
>> [Please keep list in CC]
>>
>> On 16/11/14 14:12, Lee, Suet wrote:
>>> Not sure if I'm doing it correctly but I tried this:
>>>
>>> mosh at ubuntu:~$ dpkg -s mpich2
>>> dpkg-query: package 'mpich2' is not installed and no information is
>>> available
>>> Use dpkg --info (= dpkg-deb --info) to examine archive files,
>>> and dpkg --contents (= dpkg-deb --contents) to list their contents.​
>>>
>>> So the problem isn't down to mpich2?
>>
>> Sorry, the package you want to look for is libmpich-dev
>>
>> Is there any reason to use a 32bit system? We explicitly do *not*
>> support 32bit systems and there isn't really a reason not to use 64bit.
>>
>> Florian
>>
>>> Suet

-------------- next part --------------
A non-text attachment was scrubbed...
Name: smime.p7s
Type: application/pkcs7-signature
Size: 2980 bytes
Desc: S/MIME Cryptographic Signature
URL: <http://mailman.ic.ac.uk/pipermail/firedrake/attachments/20141118/80b5d586/attachment.p7s>