[firedrake] Crash in projection on ARCHER

[Eike Mueller]

Hi Lawrence,

thanks, this fixes that problem, however I now get the error below.

Cheers,

Eike

Traceback (most recent call last):
   File 
"/work/n02/n02/eike//git_workspace/firedrake-helmholtzsolver/source/driver.py", 
line 619, in <module>
     main(parameter_filename)
   File 
"/work/n02/n02/eike//git_workspace/firedrake-helmholtzsolver/source/driver.py", 
line 552, in main
     mesh_hierarchy = build_mesh_hierarchy(param_grid,param_orography)
   File 
"/work/n02/n02/eike//git_workspace/firedrake-helmholtzsolver/source/driver.py", 
line 160, in build_mesh_hierarchy
     host_mesh_hierarchy = MeshHierarchy(coarse_host_mesh,nlevel)
   File 
"/work/n02/n02/eike/git_workspace/firedrake/firedrake/mg/mesh.py", line 
74, in __init__
     m.init()
   File "/work/n02/n02/eike/git_workspace/firedrake/firedrake/mesh.py", 
line 415, in init
     self._callback(self)
   File "/work/n02/n02/eike/git_workspace/firedrake/firedrake/mesh.py", 
line 382, in callback
     self._coordinate_fs = functionspace.VectorFunctionSpace(self, 
"Lagrange", 1)
   File "/work/n02/n02/eike/git_workspace/PyOP2/pyop2/caching.py", line 
160, in __new__
     obj = make_obj()
   File "/work/n02/n02/eike/git_workspace/PyOP2/pyop2/caching.py", line 
141, in make_obj
     obj.__init__(*args, **kwargs)
   File 
"/work/n02/n02/eike/git_workspace/firedrake/firedrake/functionspace.py", 
line 582, in __init__
     super(VectorFunctionSpace, self).__init__(mesh, element, name, 
dim=dim, rank=1)
   File 
"/work/n02/n02/eike/git_workspace/firedrake/firedrake/functionspace.py", 
line 111, in __init__
     self._halo = halo.Halo(dm)
   File "/work/n02/n02/eike/git_workspace/firedrake/firedrake/halo.py", 
line 57, in __init__
     self.sf = dmplex.prune_sf(sf)
AttributeError: 'module' object has no attribute 'prune_sf'


On 02/04/15 14:15, Lawrence Mitchell wrote:
>
>> On 2 Apr 2015, at 13:48, Eike Mueller <E.Mueller at bath.ac.uk> wrote:
>>
>> Dear firedrakers,
>>
>> I just updated all modules on ARCHER and tried to run my code there. However, I get the error below.
>
> Oops, my mistake.
>
> I've added a test for this behaviour and fixed it.  Can you please update firedrake to latest master please?
>
> Cheers,
>
> Lawrence
>
>
>
> _______________________________________________
> firedrake mailing list
> firedrake at imperial.ac.uk
> https://mailman.ic.ac.uk/mailman/listinfo/firedrake
>

-- 
Dr Eike Hermann Mueller
Lecturer in Scientific Computing

Department of Mathematical Sciences
University of Bath
Bath BA2 7AY, United Kingdom

+44 1225 38 6241
e.mueller at bath.ac.uk
http://people.bath.ac.uk/em459/