[firedrake] Configure error on ARCHER

Florian Rathgeber florian.rathgeber at imperial.ac.uk
Thu Jan 1 09:31:02 GMT 2015


On 31/12/14 16:22, Jacobs, Christian T wrote:
> I'm trying to build an up-to-date version of PETSc on ARCHER. I'm using the script in the Firedrake petsc directory for configuring: /work/y07/y07/fdrake/petsc/reconfigure-cray-gnu-shared.py and the following steps:
> 
> cd $WORK/build_new/petsc
> source ~/firedrake.env
> python reconfigure-cray-gnu-shared.py
> 
> firedrake.env contains:
> 
> module unload PrgEnv-cray
> module load PrgEnv-gnu
> module unload python
> module load anaconda
> 
> # Add fdrake module path
> export FDRAKE_DIR=/work/y07/y07/fdrake
> module use $FDRAKE_DIR/modules
> 
> # Load build environment
> module load fdrake-build-env
> module load fdrake-python-env
> 
> export PETSC_ARCH=cray-gnu-shared
> export PETSC_DIR=$WORK/build_new/petsc
> 
> The configuration step fails with a segmentation fault when making 'ml'. Has anyone else encountered this issue? Does the configuration script need updating?
> output_configure.log: https://gist.github.com/ctjacobs/8611d07eae5dfb1f39f2

I would need configure.log to be able to say anything. Afaik no one has
tried configuring with ml on ARCHER, so it may work with our reconfigure
script.

Happy New Year!

Florian

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